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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3274485_3275890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3274485 - 3275890

Intron Length:

1406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCGTCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

CCTTGTTTAAGT

Flanking Amino Acid:

YDLPWFRSLSWYFLLCVNYF

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

77.3

0.61

0.9

68.7

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

52.3

0.15

2.1

70.57

Associated Gene:

Gene:

CDS1

Ensembl Gene ID:

ENSAPLG00000003109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033126

3264258 - 3290504

26247

ENSAPLT00000003172

3270552 - 3290504

19953