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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3276031_3277465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3276031 - 3277465

Intron Length:

1435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACACAT

U12 Branch Point Sequence:

CTTTGTTTTACA

Flanking Amino Acid:

RFISFALYLAGFCMFVLSLV

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.3

1.09

0.7

86.7

22.1

Major BPS

69.9

0.49

75.2

29.8

Major PPT

88.8

0.87

0.7

83.2

31.9

Minor 5ss

-2.1

3.1

39.9

46.1

Minor BPS

54.3

0.13

2.1

70.62

41.9

Associated Gene:

Gene:

CDS1

Ensembl Gene ID:

ENSAPLG00000003109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033126

3264258 - 3290504

26247

ENSAPLT00000003172

3270552 - 3290504

19953