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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3281481_3283367_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3281481 - 3283367

Intron Length:

1887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGTGCCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TCTCTCTCTCTT

Flanking Amino Acid:

FFFGRTPLIKLSPKKTWEGF

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

67.3

0.39

0.9

60.7

40.3

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

34.8

-1.1

3.5

60.73

43.3

Associated Gene:

Gene:

CDS1

Ensembl Gene ID:

ENSAPLG00000003109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033126

3264258 - 3290504

26247

ENSAPLT00000003172

3270552 - 3290504

19953