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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3283437_3284189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3283437 - 3284189

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTCTGCTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TAATGCATATTT

Flanking Amino Acid:

GISTVVFGFIFSYFLAQYQY

Intron Amino Acid Position:

257

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

76.1

32.7

Major BPS

77.9

0.69

0.8

75.9

Major PPT

0.79

0.8

76.7

37.5

Minor 5ss

38.6

-1.3

2.8

51.7

39.2

Minor BPS

45.9

-0.2

2.2

67.04

43.6

Associated Gene:

Gene:

CDS1

Ensembl Gene ID:

ENSAPLG00000003109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033126

3264258 - 3290504

26247

ENSAPLT00000003172

3270552 - 3290504

19953