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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3289018_3290199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3289018 - 3290199

Intron Length:

1182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGGAT

5'SS Class:

major

3'SS Sequence:

TTTTCATTGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTGACA

Flanking Amino Acid:

FVHVYITSFIRGPNPSKLLK

Intron Amino Acid Position:

382

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

67.6

37.3

Major BPS

100

1.24

0.5

100

Major PPT

80.2

0.68

76.9

36.3

Minor 5ss

-1.5

3.6

55.1

49.2

Minor BPS

77.6

0.86

1.5

88.13

28.3

Associated Gene:

Gene:

CDS1

Ensembl Gene ID:

ENSAPLG00000003109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033126

3264258 - 3290504

26247

ENSAPLT00000003172

3270552 - 3290504

19953