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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33073805_33093220_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
33073805 - 33093220

Intron Length:
19416

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTGAGTATA

5'SS Class:
major

3'SS Sequence:
TTTCTCCCCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTCAA

U12 Branch Point Sequence:
TTACTTTCAAGC

Flanking Amino Acid:
SSWTSLEFIAEPLIGTVHPA

Intron Amino Acid Position:
204

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.9
0.59
1
76.9
33.7

Major BPS
78.4
0.71
0.9
81.3
29.8

Major PPT
82.4
0.73
0.7
76.9
25.2

Minor 5ss
35.1
-1.7
2.8
38.8
40.3

Minor BPS
48.2
-0.1
1.8
60.34
38.9

Associated Gene:

Gene:
QDPR

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33073425 - 33099125
25701