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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33098907_33099038_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33098907 - 33099038

Intron Length:
132

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGCGCC

5'SS Class:
major

3'SS Sequence:
CTCGCCGCCCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTAAC

U12 Branch Point Sequence:
CGGGCGCTAACG

Flanking Amino Acid:
CVQYFKARNWWVASIDLAEN

Intron Amino Acid Position:
30

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.57
1
60.2
39.4

Major BPS
57.1
0.18
1.1
59
36

Major PPT
63.6
0.31
0.9
53.5
36.6

Minor 5ss
31.7
-2.1
3.2
34
41.8

Minor BPS
40.9
-0.8
2.4
44.2
47.4

Associated Gene:

Gene:
QDPR

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33073425 - 33099125
25701