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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33121687_33122143_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33121687 - 33122143

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCACTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TATTATTTACTT

Flanking Amino Acid:

VQKPEQVIKEDVSELRNELQ

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

75.2

37.7

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

79.2

0.66

0.8

73.5

30.4

Minor 5ss

46.4

-0.4

3.1

64.5

46.9

Minor BPS

58.9

0.36

1.8

77.77

Associated Gene:

Gene:

MED28

Ensembl Gene ID:

ENSAPLG00000007405

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007679

33121047 - 33122341

1295