Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_33175003_33176092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33175003 - 33176092

Intron Length:

1090

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTTATATTATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

AATTGTTTAAAT

Flanking Amino Acid:

LLQQGLNDRSDAVKEVMKKK

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

31.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

71.9

0.49

0.9

71.3

38.4

Minor 5ss

32.2

-2

3.5

44.1

44.7

Minor BPS

59.9

0.39

1.8

76.83

39.5

Associated Gene:

Gene:

NCAPG

Ensembl Gene ID:

ENSAPLG00000006687

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024955

33170905 - 33195397

24493

ENSAPLT00000006983

33168927 - 33195154

26228