Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_33246554_33246798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33246554 - 33246798

Intron Length:

245

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

ATGTATCTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTCCATGTATCT

Flanking Amino Acid:

FCNLHKETVSDRASIIGSSQ

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

74.7

41.5

Major BPS

82.1

0.8

71.6

36.4

Major PPT

72.2

0.5

0.9

63.2

43.2

Minor 5ss

41.3

-1

2.8

52.3

44.3

Minor BPS

43.4

-0.4

2.3

65.82

44.9

Associated Gene:

Gene:

LCORL

Ensembl Gene ID:

ENSAPLG00000006384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006626

33223573 - 33279921

56349