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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33246879_33254215_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33246879 - 33254215

Intron Length:

7337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTTAAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TCTTCTTTTAAG

Flanking Amino Acid:

RLRRDLSLFEDCEPEELTDW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.3

34.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

81.6

0.71

0.9

86.7

24.6

Minor 5ss

34.4

-1.8

2.8

41.5

45.1

Minor BPS

56.6

0.06

1.8

64.21

43.7

Associated Gene:

Gene:

LCORL

Ensembl Gene ID:

ENSAPLG00000006384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006626

33223573 - 33279921

56349