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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33254282_33279764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33254282 - 33279764

Intron Length:

25483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCGCC

5'SS Class:

major

3'SS Sequence:

CTTTTGTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

CTTTGATTAACT

Flanking Amino Acid:

SWRHRLMHCVGFESILEGLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

66.1

41.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

88.1

0.86

0.8

80.3

37.3

Minor 5ss

37.2

-1.5

3.3

43.1

44.2

Minor BPS

63.9

0.51

2.1

84.99

41.5

Associated Gene:

Gene:

LCORL

Ensembl Gene ID:

ENSAPLG00000006384

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006626

33223573 - 33279921

56349