Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_3357223_3371375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3357223 - 3371375

Intron Length:

14153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CATTTCTGAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

82.6

29.9

Major BPS

100

1.24

0.5

100

Major PPT

69.8

0.44

65.8

39.5

Minor 5ss

30.7

-2.2

3.1

40.9

45.4

Minor BPS

67.8

0.55

1.4

73.13

38.5

Associated Gene:

Gene:

WDFY3

Ensembl Gene ID:

ENSAPLG00000016174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043636

3357131 - 3501171

144041

ENSAPLT00000025718

3357131 - 3501171

144041