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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33777839_33778064_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33777839 - 33778064

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAC

U12 Branch Point Sequence:

CCCCCGTGAACT

Flanking Amino Acid:

ELQDALCTHLARYAPPELER

Intron Amino Acid Position:

1537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.7

35.3

Major BPS

61.5

0.29

1.4

63.1

44.5

Major PPT

69.6

0.44

0.9

39.9

Minor 5ss

35.2

-1.7

2.7

39.3

40.3

Minor BPS

46.4

-0.1

2.2

61.75

47.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040007

33775529 - 33790964

15436