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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33778477_33778619_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33778477 - 33778619

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTGAA

5'SS Class:

major

3'SS Sequence:

TTTCTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTTAC

U12 Branch Point Sequence:

GCCTCGTTACCC

Flanking Amino Acid:

ARSTKMFFESEEEYLRYSAL

Intron Amino Acid Position:

1445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

33.6

Major BPS

58.9

0.22

1.3

51.3

43.9

Major PPT

86.4

0.82

0.8

80.9

31.1

Minor 5ss

29.5

-2.4

3.2

40.8

45.4

Minor BPS

47.4

-0.2

2.3

58.41

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040007

33775529 - 33790964

15436