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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33784096_33784330_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33784096 - 33784330

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGGGCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

TCCAGTTCAAAG

Flanking Amino Acid:

ILLLSISSSQNLQTNLAVAQ

Intron Amino Acid Position:

774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

67.3

0.39

57.5

43.2

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

40.6

-0.8

40.94

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040007

33775529 - 33790964

15436