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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33784715_33784845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33784715 - 33784845

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCGAC

U12 Branch Point Sequence:

CCGTGCCGACTG

Flanking Amino Acid:

AQPEEPSEAQGIISLVCQAA

Intron Amino Acid Position:

681

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

78.3

32.5

Major BPS

47.5

-0.1

1.3

43.8

40.8

Major PPT

84.8

0.78

0.8

79.9

32.1

Minor 5ss

-0.8

58.3

46.6

Minor BPS

33.9

-1.3

2.1

31.8

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040007

33775529 - 33790964

15436