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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33787725_33788017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33787725 - 33788017

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

ATGTTCCCACCT

Flanking Amino Acid:

LAISSVVYSELTADTTEHSQ

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

78.5

0.64

0.8

72.6

32.3

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

45.5

-0.2

2.1

66.88

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040007

33775529 - 33790964

15436