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Intron Name: Anas_platyrhynchos_platyrhynchos_4_33993768_34119076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33993768 - 34119076

Intron Length:

125309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTGTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TAAGTTTCAATT

Flanking Amino Acid:

LFLGTPKLYRLDLSENQIQA

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

45.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.81

0.8

88.9

28.2

Minor 5ss

-1.3

2.8

52.4

44.2

Minor BPS

0.08

1.6

65.42

39.7

Associated Gene:

Gene:

SLIT2

Ensembl Gene ID:

ENSAPLG00000009781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022588

33973902 - 34228295

254394

ENSAPLT00000010276

33973902 - 34228146

254245

ENSAPLT00000010190

33973902 - 34228295

254394

ENSAPLT00000045581

33973902 - 34228295

254394