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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3409115_3421112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3409115 - 3421112

Intron Length:

11998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TAATGGTGATTT

Flanking Amino Acid:

LYKVATDSFDRHTYHSVSTP

Intron Amino Acid Position:

805

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

86.2

29.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

82.9

0.74

0.8

77.3

31.5

Minor 5ss

44.5

-0.6

2.5

60.9

43.5

Minor BPS

39.2

-0.7

2.5

58.69

44.5

Associated Gene:

Gene:

WDFY3

Ensembl Gene ID:

ENSAPLG00000016174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020887

3371376 - 3501171

129796

ENSAPLT00000016928

3365139 - 3499808

134670