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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34119149_34128875_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34119149 - 34128875

Intron Length:

9727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

ATCTGTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ATCTGTTTAACA

Flanking Amino Acid:

AFRGAVDIKNLQLDYNQISC

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

81.9

0.79

0.9

80.1

Major PPT

74.3

0.55

69.4

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

64.9

0.46

1.8

73.1

39.3

Associated Gene:

Gene:

SLIT2

Ensembl Gene ID:

ENSAPLG00000009781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010276

33973902 - 34228146

254245

ENSAPLT00000010190

33973902 - 34228295

254394

ENSAPLT00000045581

33973902 - 34228295

254394

ENSAPLT00000022588

33973902 - 34228295

254394