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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34128948_34133034_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34128948 - 34133034

Intron Length:

4087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

CTTTACTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TCTTCTTTACTT

Flanking Amino Acid:

AFRALRDLEVLTLNNNNITR

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

0.52

1.1

77.7

35.3

Major PPT

81.8

0.71

0.8

75.9

32.3

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

69.6

0.69

1.6

82.98

39.3

Associated Gene:

Gene:

SLIT2

Ensembl Gene ID:

ENSAPLG00000009781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045581

33973902 - 34228295

254394

ENSAPLT00000022588

33973902 - 34228295

254394

ENSAPLT00000010276

33973902 - 34228146

254245

ENSAPLT00000010190

33973902 - 34228295

254394