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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34136056_34138467_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34136056 - 34138467

Intron Length:

2412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

AGTTTTAGAAGA

Flanking Amino Acid:

EVQKREFVCSGHQSFMAPSC

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

68.5

36.3

Major BPS

0.5

39.8

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

29.6

-2.3

3.5

35.6

42.2

Minor BPS

44.2

-0.4

1.9

55.84

36.9

Associated Gene:

Gene:

SLIT2

Ensembl Gene ID:

ENSAPLG00000009781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010190

33973902 - 34228295

254394

ENSAPLT00000045581

33973902 - 34228295

254394

ENSAPLT00000022588

33973902 - 34228295

254394

ENSAPLT00000010276

33973902 - 34228146

254245