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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34138607_34153957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34138607 - 34153957

Intron Length:

15351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGCGTAAT

5'SS Class:

major

3'SS Sequence:

AATTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTATTTTTATGC

Flanking Amino Acid:

PTNLPETITEIRLEQNSIKV

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

76.2

34.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.2

0.68

0.9

73.7

40.8

Minor 5ss

33.3

-1.9

3.1

46.1

42.6

Minor BPS

48.5

-0.1

1.8

58.99

40.4

Associated Gene:

Gene:

SLIT2

Ensembl Gene ID:

ENSAPLG00000009781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045581

33973902 - 34228295

254394

ENSAPLT00000022588

33973902 - 34228295

254394

ENSAPLT00000010276

33973902 - 34228146

254245

ENSAPLT00000010190

33973902 - 34228295

254394