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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34162127_34168829_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34162127 - 34168829

Intron Length:

6703

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTAAGTTGA

5'SS Class:

major

3'SS Sequence:

TCATTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTTTTCTGAAAT

Flanking Amino Acid:

PDHIPQYTAELRLNNNEFSV

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

69.7

37.2

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

81.5

0.71

0.8

77.4

31.1

Minor 5ss

42.1

-0.9

2.8

55.1

43.5

Minor BPS

0.8

1.5

90.14

33.1

Associated Gene:

Gene:

SLIT2

Ensembl Gene ID:

ENSAPLG00000009781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045581

33973902 - 34228295

254394

ENSAPLT00000022588

33973902 - 34228295

254394

ENSAPLT00000010276

33973902 - 34228146

254245

ENSAPLT00000010190

33973902 - 34228295

254394