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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34253836_34255155_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

34253836 - 34255155

Intron Length:

1320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGGTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATATTTTTAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

72.3

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.5

0.71

0.9

76.5

37.7

Minor 5ss

31.6

-2.1

3.1

31.9

42.5

Minor BPS

71.4

0.65

1.1

72.84

31.8

Associated Gene:

Gene:

PACRGL

Ensembl Gene ID:

ENSAPLG00000009745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010143

34253081 - 34265461

12381