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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34260456_34262170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34260456 - 34262170

Intron Length:

1715

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

CTTCCTTTGAAG

Flanking Amino Acid:

RLVPVLKAALAHSDDEVFER

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

76.2

Major BPS

74.6

0.61

1.4

34.5

Major PPT

0.54

74.6

27.8

Minor 5ss

46.4

-0.4

2.8

64.2

41.4

Minor BPS

56.2

0.05

1.6

60.92

41.2

Associated Gene:

Gene:

PACRGL

Ensembl Gene ID:

ENSAPLG00000009745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010143

34253081 - 34265461

12381