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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34262279_34263285_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34262279 - 34263285

Intron Length:

1007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTTCAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTTACT

Flanking Amino Acid:

NDHLKHLLTNLSRRLMDKKF

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.2

0.45

0.9

66.4

33.8

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

67.8

0.64

1.8

89.13

35.2

Associated Gene:

Gene:

PACRGL

Ensembl Gene ID:

ENSAPLG00000009745

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010143

34253081 - 34265461

12381