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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3445933_3447270_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3445933 - 3447270

Intron Length:

1338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCCAC

5'SS Class:

major

3'SS Sequence:

TGTGTGTGTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATCAA

U12 Branch Point Sequence:

ATGATGTTATTT

Flanking Amino Acid:

QGFPSSYDLLRFGQFISSTL

Intron Amino Acid Position:

1580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.3

54.1

45.2

Major BPS

70.2

0.5

72.1

Major PPT

0.2

1.2

56.1

47.9

Minor 5ss

42.3

-0.8

3.3

58.6

46.2

Minor BPS

44.4

-0.3

2.2

62.07

42.7

Associated Gene:

Gene:

WDFY3

Ensembl Gene ID:

ENSAPLG00000016174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025718

3357131 - 3501171

144041

ENSAPLT00000043636

3357131 - 3501171

144041

ENSAPLT00000020887

3371376 - 3501171

129796

ENSAPLT00000035211

3364321 - 3498808

134488

ENSAPLT00000016928

3365139 - 3499808

134670

ENSAPLT00000033481

3371376 - 3498808

127433

ENSAPLT00000027095

3364321 - 3498808

134488