Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_34639961_34700185_R

Intron Information:

Intron Rank:

152981

Intron Class:

major

Intron Phase:

Intron Coordinates:

34639961 - 34700185

Intron Length:

60225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAGGACGG

5'SS Class:

major

3'SS Sequence:

CCTTTTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTATGATTAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.1

48.6

47.6

Major BPS

84.6

0.86

41.2

Major PPT

91.3

0.93

0.6

86.6

24.3

Minor 5ss

30.5

-2.2

3.3

39.3

Minor BPS

58.4

0.26

73.44

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022527

34639474 - 34701453

61980