Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_3464433_3467909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3464433 - 3467909

Intron Length:

3477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

CATCCCACAACA

Flanking Amino Acid:

ASLKCWQNHLAHEKKCISRG

Intron Amino Acid Position:

2233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

89.9

0.9

0.7

29.4

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

49.8

-0

1.9

63.91

41.6

Associated Gene:

Gene:

WDFY3

Ensembl Gene ID:

ENSAPLG00000016174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027095

3364321 - 3498808

134488

ENSAPLT00000025718

3357131 - 3501171

144041

ENSAPLT00000043636

3357131 - 3501171

144041

ENSAPLT00000020887

3371376 - 3501171

129796

ENSAPLT00000035211

3364321 - 3498808

134488

ENSAPLT00000016928

3365139 - 3499808

134670

ENSAPLT00000033481

3371376 - 3498808

127433