Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_34772747_34773170_F

Intron Information:

Intron Rank:

125026

Intron Class:

major

Intron Phase:

Intron Coordinates:

34772747 - 34773170

Intron Length:

424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTAAA

5'SS Class:

major

3'SS Sequence:

TTTCTTTTCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

77.8

31.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

79.3

0.66

81.7

27.5

Minor 5ss

41.2

-1

2.5

45.5

Minor BPS

53.1

0.18

2.1

82.17

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039578

34772597 - 34774231

1635