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Intron Name: Anas_platyrhynchos_platyrhynchos_4_3478573_3479124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3478573 - 3479124

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

ATGTACTTAATT

Flanking Amino Acid:

GQRPNTSVEQGSGLLSTLVG

Intron Amino Acid Position:

2662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

77.9

38.6

Major BPS

78.2

0.7

77.9

32.1

Major PPT

76.5

0.6

0.9

77.6

31.2

Minor 5ss

40.6

-1

2.9

49.4

46.6

Minor BPS

72.8

0.79

1.4

83.46

37.5

Associated Gene:

Gene:

WDFY3

Ensembl Gene ID:

ENSAPLG00000016174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016928

3365139 - 3499808

134670

ENSAPLT00000033481

3371376 - 3498808

127433

ENSAPLT00000027095

3364321 - 3498808

134488

ENSAPLT00000025718

3357131 - 3501171

144041

ENSAPLT00000043636

3357131 - 3501171

144041

ENSAPLT00000020887

3371376 - 3501171

129796

ENSAPLT00000035211

3364321 - 3498808

134488