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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34805646_34805978_R


Intron Information:

Intron Rank:
12

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
34805646 - 34805978

Intron Length:
333

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTGTATAC

5'SS Class:
weak_major

3'SS Sequence:
TGTTTATTTCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTTATTTTAATC

Flanking Amino Acid:
SNTLSSLALKNTIVEASIQL

Intron Amino Acid Position:
614

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
59.1
0.22
1.2
57
36.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
81.8
0.72
0.8
74.4
40.4

Minor 5ss
33.3
-1.9
3.1
42.2
44.7

Minor BPS
73
0.7
1.1
78.22
31.1

Associated Gene:

Gene:
ADGRA3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34794224 - 34848039
53816

34794224 - 34848039
53816