Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_34806183_34806448_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34806183 - 34806448

Intron Length:

266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTTTTTGTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTGATT

Flanking Amino Acid:

LANGAQVYSTYSPNIALEAY

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.6

0.87

0.7

88.2

29.1

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

71.1

0.75

1.4

87.7

31.2

Associated Gene:

Gene:

ADGRA3

Ensembl Gene ID:

ENSAPLG00000009086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046740

34794224 - 34848039

53816

ENSAPLT00000009486

34794224 - 34848039

53816