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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34812432_34818956_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
34812432 - 34818956

Intron Length:
6525

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTGGTAAC

5'SS Class:
major

3'SS Sequence:
TCTGACTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAC

U12 Branch Point Sequence:
TTGCTTCTGACT

Flanking Amino Acid:
ERVVNNKGDFRWPRTLAGIT

Intron Amino Acid Position:
374

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1.2
73.5
37.5

Major BPS
81.4
0.78
0.9
71.3
36.7

Major PPT
71.4
0.48
0.9
61.9
39.6

Minor 5ss
31
-2.2
2.8
36.5
40.6

Minor BPS
51.6
0.13
1.6
72.56
38.6

Associated Gene:

Gene:
ADGRA3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34794224 - 34848039
53816

34794224 - 34848039
53816