Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_34823965_34825319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34823965 - 34825319

Intron Length:

1355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTCCTATTGATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTATTCTGATTT

Flanking Amino Acid:

AFLGLSSLKRLDLTNNRIGC

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.5

41.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

71.6

0.49

68.9

36.2

Minor 5ss

-1.2

2.8

55.8

41.5

Minor BPS

58.2

0.33

1.7

77.32

39.3

Associated Gene:

Gene:

ADGRA3

Ensembl Gene ID:

ENSAPLG00000009086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046740

34794224 - 34848039

53816

ENSAPLT00000009486

34794224 - 34848039

53816