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Intron Name: Anas_platyrhynchos_platyrhynchos_4_34825392_34833330_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
34825392 - 34833330

Intron Length:
7939

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTAAGTACT

5'SS Class:
major

3'SS Sequence:
TTTTTCTACATAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
AATGTTTTAATT

Flanking Amino Acid:
SFSGLNLLERLDLKNNLIST

Intron Amino Acid Position:
122

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.2
0.67
1
79.2
33.9

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
80.3
0.68
0.8
77.3
30.4

Minor 5ss
40.9
-1
2.8
58.9
39.3

Minor BPS
64.8
0.54
1.3
74.5
36.9

Associated Gene:

Gene:
ADGRA3

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34794224 - 34848039
53816

34794224 - 34848039
53816