Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_3487920_3489240_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3487920 - 3489240

Intron Length:

1321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACCAT

5'SS Class:

major

3'SS Sequence:

TGATGAATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTGATGAATT

Flanking Amino Acid:

INNFGQIPKQLFKKPHPPKR

Intron Amino Acid Position:

2949

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

62.3

43.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

68.9

0.42

1.1

63.7

Minor 5ss

37.8

-1.4

3.4

55.9

48.3

Minor BPS

0.24

2.1

82.16

39.2

Associated Gene:

Gene:

WDFY3

Ensembl Gene ID:

ENSAPLG00000016174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027095

3364321 - 3498808

134488

ENSAPLT00000025718

3357131 - 3501171

144041

ENSAPLT00000043636

3357131 - 3501171

144041

ENSAPLT00000020887

3371376 - 3501171

129796

ENSAPLT00000035211

3364321 - 3498808

134488

ENSAPLT00000016928

3365139 - 3499808

134670

ENSAPLT00000033481

3371376 - 3498808

127433