Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_4_34884682_34885972_F

Intron Information:

Intron Rank:

150824

Intron Class:

major

Intron Phase:

Intron Coordinates:

34884682 - 34885972

Intron Length:

1291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTCACTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTGCTCTGAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

76.3

30.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

70.6

0.46

1.1

73.9

35.5

Minor 5ss

37.7

-1.4

46.2

49.1

Minor BPS

68.1

0.65

1.4

82.19

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031038

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040729

34884610 - 34885986

1377