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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35176803_35179713_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35176803 - 35179713

Intron Length:

2911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TGCCTCTTAACT

Flanking Amino Acid:

QFCKSNYADLDSNSDDFDPA

Intron Amino Acid Position:

753

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.9

90.9

28.7

Major BPS

75.1

0.62

65.6

Major PPT

83.5

0.75

0.9

80.3

37.3

Minor 5ss

40.3

-1.1

3.2

59.2

45.4

Minor BPS

73.9

0.83

1.2

81.89

39.4

Associated Gene:

Gene:

PPARGC1A

Ensembl Gene ID:

ENSAPLG00000005303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017979

35174967 - 35238833

63867

ENSAPLT00000005531

35176699 - 35297863

121165

ENSAPLT00000041371

35176699 - 35342065

165367

ENSAPLT00000031176

35174967 - 35238833

63867

ENSAPLT00000025159

35174967 - 35338102

163136