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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35180342_35189296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35180342 - 35189296

Intron Length:

8955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGCATT

5'SS Class:

major

3'SS Sequence:

TCTTTATCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TCTTTATCAACA

Flanking Amino Acid:

QRERQRQKAIEERRVIYVSK

Intron Amino Acid Position:

662

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

76.5

38.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

78.3

0.64

0.9

74.3

34.2

Minor 5ss

47.9

-0.2

2.9

72.7

37.8

Minor BPS

58.6

0.27

1.8

72.43

39.5

Associated Gene:

Gene:

PPARGC1A

Ensembl Gene ID:

ENSAPLG00000005303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025159

35174967 - 35338102

163136

ENSAPLT00000017979

35174967 - 35238833

63867

ENSAPLT00000005531

35176699 - 35297863

121165

ENSAPLT00000041371

35176699 - 35342065

165367

ENSAPLT00000031176

35174967 - 35238833

63867