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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35189418_35189551_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35189418 - 35189551

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGCAT

5'SS Class:

major

3'SS Sequence:

TTATGTTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

CTTGATTTAATG

Flanking Amino Acid:

RSRSPYSRRPRYDSYEEYQH

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

62.4

43.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

76.4

0.59

0.9

69.6

41.4

Minor 5ss

31.1

-2.2

3.6

46.8

48.6

Minor BPS

54.3

-0

1.7

59.41

43.3

Associated Gene:

Gene:

PPARGC1A

Ensembl Gene ID:

ENSAPLG00000005303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017979

35174967 - 35238833

63867

ENSAPLT00000005531

35176699 - 35297863

121165

ENSAPLT00000041371

35176699 - 35342065

165367

ENSAPLT00000031176

35174967 - 35238833

63867

ENSAPLT00000025159

35174967 - 35338102

163136