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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35203407_35204300_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35203407 - 35204300

Intron Length:

894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAACT

5'SS Class:

major

3'SS Sequence:

CCCTGTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTTATT

Flanking Amino Acid:

RIRTSPVVVKTENSWSNKAK

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

71.6

38.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.5

0.46

73.9

34.5

Minor 5ss

34.4

-1.8

3.3

50.3

45.7

Minor BPS

69.2

0.69

1.5

86.8

32.8

Associated Gene:

Gene:

PPARGC1A

Ensembl Gene ID:

ENSAPLG00000005303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031176

35174967 - 35238833

63867

ENSAPLT00000025159

35174967 - 35338102

163136

ENSAPLT00000005531

35176699 - 35297863

121165

ENSAPLT00000041371

35176699 - 35342065

165367