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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35233717_35297842_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35233717 - 35297842

Intron Length:

64126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTCG

5'SS Class:

major

3'SS Sequence:

CTGTTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TCTTTCTGCATT

Flanking Amino Acid:

MERGQVQCAALVGEDQP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

63.3

43.9

Major BPS

0.82

0.8

24.9

Major PPT

82.6

0.73

0.8

77.4

31.4

Minor 5ss

42.8

-0.8

3.1

56.2

48.2

Minor BPS

54.3

0.22

1.9

75.82

41.6

Associated Gene:

Gene:

PPARGC1A

Ensembl Gene ID:

ENSAPLG00000005303

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005531

35176699 - 35297863

121165