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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35537267_35544441_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
35537267 - 35544441

Intron Length:
7175

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTATGTGTG

5'SS Class:
strong_major

3'SS Sequence:
TTCTCTTTACTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGATAAC

U12 Branch Point Sequence:
TTTCTCTTTACT

Flanking Amino Acid:
KALVTGYFMQVAHLERTGHY

Intron Amino Acid Position:
643

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.9
0.89
0.9
77.9
36.9

Major BPS
62.7
0.32
1.2
64
39.8

Major PPT
78.6
0.64
0.8
74.1
35.3

Minor 5ss
42.4
-0.8
3.1
57.3
47.4

Minor BPS
72.2
0.78
1.6
89.51
34.3

Associated Gene:

Gene:
DHX15

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35535824 - 35580807
44984