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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35572361_35574552_R


Intron Information:

Intron Rank:
2

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
35572361 - 35574552

Intron Length:
2192

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGTTCT

5'SS Class:
strong_major

3'SS Sequence:
GCTTTCATTTGAG|A

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
TGGCCTTTAACA

Flanking Amino Acid:
GETGSGKTTQISQATLVAQR

Intron Amino Acid Position:
137

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93
1.01
0.7
86.6
23.3

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
59.1
0.2
1.7
70.2
40.1

Minor 5ss
37.4
-1.4
2.9
50.4
46

Minor BPS
71.8
0.68
1.2
73.61
38

Associated Gene:

Gene:
DHX15

Ensembl Gene ID:

Chromosome:
4

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

35535824 - 35580807
44984