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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35611208_35611307_R

Intron Information:

Intron Rank:

140224

Intron Class:

major

Intron Phase:

Intron Coordinates:

35611208 - 35611307

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTTCCT

5'SS Class:

major

3'SS Sequence:

TTTCCTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

TTTTCCTTCTGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

68.2

42.7

Major BPS

58.6

0.22

1.5

38.9

Major PPT

89.3

0.88

0.6

84.8

22.8

Minor 5ss

35.5

-1.6

3.2

51.3

45.1

Minor BPS

43.3

-0.5

3.7

73.85

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022819

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044100

35610478 - 35611468

991

ENSAPLT00000037358

35609246 - 35611468

2223

ENSAPLT00000022286

35606316 - 35611364

5049