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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35628305_35628497_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35628305 - 35628497

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATCCG

5'SS Class:

strong_major

3'SS Sequence:

CTGCACTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTCCTCTGCACT

Flanking Amino Acid:

ATEASCGDRERLSVARMLLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

68.7

42.2

Major BPS

72.7

0.56

30.1

Major PPT

68.3

0.41

0.9

61.6

34.5

Minor 5ss

33.9

-1.8

2.9

42.1

44.5

Minor BPS

50.5

0.1

1.9

73.74

43.1

Associated Gene:

Gene:

SOD3

Ensembl Gene ID:

ENSAPLG00000001811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001804

35627409 - 35629413

2005