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Intron Name: Anas_platyrhynchos_platyrhynchos_4_35642567_35643944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

35642567 - 35643944

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAA

U12 Branch Point Sequence:

TTTTCTTTTGCT

Flanking Amino Acid:

LEIAGLWSLPGLSYNVSVGF

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

0.08

61.4

34.3

Major PPT

64.9

0.34

1.1

64.5

36.9

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

48.1

-0

3.6

87.77

37.8

Associated Gene:

Gene:

CCDC149

Ensembl Gene ID:

ENSAPLG00000010671

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037800

35632538 - 35680171

47634